ENSDARG00000019444


Danio rerio

Features
Gene ID: ENSDARG00000019444
  
Biological name :ssr4
  
Synonyms : signal sequence receptor, delta / ssr4
  
Possible biological names infered from orthology : P51571 / Q62186 / signal sequence receptor subunit 4
  
Species: Danio rerio
  
Chr. number: 23
Strand: -1
Band:
Gene start: 18569291
Gene end: 18572685
  
Corresponding Affymetrix probe sets: Dr.14477.1.S1_at (Zebrafish Array)   NM_001002082_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000047174
Ensembl peptide - ENSDARP00000122004
NCBI entrez gene - 326701     See in Manteia.
RefSeq - NM_001002082
RefSeq Peptide - NP_001002082
swissprot - F1QXF8
swissprot - E9QHX8
ZFIN ID - ZDB-GENE-030131-4900
Ensembl - ENSDARG00000019444
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SSR4ENSG00000180879Homo sapiens
 Ssr4ENSMUSG00000002014Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR008855  Translocon-associated


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0071391 cellular response to estrogen stimulus IDA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001117 post-vent region post-vent region curved , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr