ENSDARG00000019774


Danio rerio

Features
Gene ID: ENSDARG00000019774
  
Biological name :zhx3
  
Synonyms : zhx3 / zinc fingers and homeoboxes 3
  
Possible biological names infered from orthology : Q8C0Q2 / Q9H4I2
  
Species: Danio rerio
  
Chr. number: 23
Strand: -1
Band:
Gene start: 2872855
Gene end: 2901167
  
Corresponding Affymetrix probe sets: Dr.10096.1.A1_at (Zebrafish Array)   Dr.26180.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000005108
Ensembl peptide - ENSDARP00000105146
Ensembl peptide - ENSDARP00000141318
Ensembl peptide - ENSDARP00000148460
NCBI entrez gene - 386659     See in Manteia.
RefSeq - XM_009296582
RefSeq - XM_009296583
RefSeq - NM_198813
RefSeq Peptide - NP_942108
swissprot - F1R0G0
swissprot - F1QQ52
ZFIN ID - ZDB-GENE-031107-1
Ensembl - ENSDARG00000019774
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ZHX3ENSGALG00000039155Gallus gallus
 ZHX3ENSG00000174306Homo sapiens
 Zhx3ENSMUSG00000035877Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-232b12.5 / ZHX3* / Q8C0Q2* / Q9H4I2* / zinc fingers and homeoboxes 3*ENSDARG0000008718624
zhx2a / zinc fingers and homeoboxes 2a / ZHX2* / Q9Y6X8* / Q8C0C0* / zinc fingers and homeoboxes 2*ENSDARG0000005516221
homeza / homeobox and leucine zipper encoding a / HOMEZ* / Q8IX15* / homeobox and leucine zipper encoding*ENSDARG0000005430413
homezb / homeobox and leucine zipper encoding b / HOMEZ* / Q8IX15* / homeobox and leucine zipper encoding*ENSDARG0000002459813
zhx2b / zinc fingers and homeoboxes 2bENSDARG000001015597


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR009057  Homeobox-like domain superfamily
 IPR013087  Zinc finger C2H2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IBA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IBA
 molecular_functionGO:0003714 transcription corepressor activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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