ENSDARG00000020031


Danio rerio

Features
Gene ID: ENSDARG00000020031
  
Biological name :cldn11a
  
Synonyms : claudin 11a / cldn11a
  
Possible biological names infered from orthology : AC026316.5 / claudin 11 / CLDN11 / O75508 / Q60771
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 25997426
Gene end: 26001173
  
Corresponding Affymetrix probe sets: Dr.12486.1.S1_at (Zebrafish Array)   NM_001002624_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000027131
NCBI entrez gene - 436897     See in Manteia.
RefSeq - NM_001002624
RefSeq Peptide - NP_001002624
swissprot - Q6DHL0
ZFIN ID - ZDB-GENE-040718-369
Ensembl - ENSDARG00000020031
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000009355Gallus gallus
 AC026316.5ENSG00000285218Homo sapiens
 CLDN11ENSG00000013297Homo sapiens
 Cldn11ENSMUSG00000037625Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cldn11b / claudin 11b / Q60771* / CLDN11* / O75508* / AC026316.5* / claudin 11*ENSDARG0000003072356


Protein motifs (from Interpro)
Interpro ID Name
 IPR003555  Claudin-11
 IPR004031  PMP-22/EMP/MP20/Claudin superfamily
 IPR017974  Claudin, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005923 bicellular tight junction IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 molecular_functionGO:0005198 structural molecule activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr