ENSDARG00000020311


Danio rerio

Features
Gene ID: ENSDARG00000020311
  
Biological name :cnih1
  
Synonyms : cnih1 / cornichon family AMPA receptor auxiliary protein 1
  
Possible biological names infered from orthology : 1 / O35372 / O95406
  
Species: Danio rerio
  
Chr. number: 13
Strand: 1
Band:
Gene start: 36592194
Gene end: 36606941
  
Corresponding Affymetrix probe sets: Dr.5348.1.S1_at (Zebrafish Array)   NM_001033106_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000007824
NCBI entrez gene - 406282     See in Manteia.
RefSeq - NM_001033106
RefSeq Peptide - NP_001028278
swissprot - B8A6D8
ZFIN ID - ZDB-GENE-040426-1944
Ensembl - ENSDARG00000020311
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CNIH1ENSGALG00000035023Gallus gallus
 CNIH1ENSG00000100528Homo sapiens
 1 ENSMUSG00000015759Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cnih2 / Q5BL21 / cornichon family AMPA receptor auxiliary protein 2 / 2 * / O35089* / Q6PI25*ENSDARG0000004366270
cnih3 / cornichon family AMPA receptor auxiliary protein 3 / 3 * / Q6ZWS4* / Q8TBE1*ENSDARG0000001495367
cnih4 / cornichon family AMPA receptor auxiliary protein 4 / Q9P003*ENSDARG0000008775926


Protein motifs (from Interpro)
Interpro ID Name
 IPR003377  Cornichon
 IPR033466  Cornichon, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016192 vesicle-mediated transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport
Cargo concentration in the ER


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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