ENSDARG00000043662


Danio rerio

Features
Gene ID: ENSDARG00000043662
  
Biological name :cnih2
  
Synonyms : cnih2 / cornichon family AMPA receptor auxiliary protein 2 / Q5BL21
  
Possible biological names infered from orthology : 2 / O35089 / Q6PI25
  
Species: Danio rerio
  
Chr. number: 10
Strand: -1
Band:
Gene start: 27028019
Gene end: 27049170
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000041840
Ensembl peptide - ENSDARP00000115028
NCBI entrez gene - 541397     See in Manteia.
swissprot - Q5BL21
ZFIN ID - ZDB-GENE-050320-96
Ensembl - ENSDARG00000043662
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CNIH2ENSG00000174871Homo sapiens
 2 ENSMUSG00000024873Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cnih3 / cornichon family AMPA receptor auxiliary protein 3 / 3 * / Q6ZWS4* / Q8TBE1*ENSDARG0000001495369
cnih1 / cornichon family AMPA receptor auxiliary protein 1 / 1 * / O35372* / O95406*ENSDARG0000002031163
cnih4 / cornichon family AMPA receptor auxiliary protein 4 / Q9P003*ENSDARG0000008775923


Protein motifs (from Interpro)
Interpro ID Name
 IPR003377  Cornichon
 IPR033466  Cornichon, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016192 vesicle-mediated transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport
Cargo concentration in the ER


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000032714 gria1b / glutamate receptor, ionotropic, AMPA 1b / GRIA1* / P23818* / P42261* / Glutamate receptor 1 * / glutamate ionotropic receptor AMPA type subunit 1*  / complex / reaction






 

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contact: otassy@igbmc.fr