ENSDARG00000020345


Danio rerio

Features
Gene ID: ENSDARG00000020345
  
Biological name :clasp2
  
Synonyms : clasp2 / cytoplasmic linker associated protein 2 / Q6NYW6
  
Possible biological names infered from orthology : CLIP-associating protein 2 isoform g / O75122
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 42693855
Gene end: 42802298
  
Corresponding Affymetrix probe sets: Dr.14760.1.A1_at (Zebrafish Array)   NM_207072_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000117340
Ensembl peptide - ENSDARP00000125688
Ensembl peptide - ENSDARP00000126160
Ensembl peptide - ENSDARP00000152257
Ensembl peptide - ENSDARP00000113962
Ensembl peptide - ENSDARP00000116634
NCBI entrez gene - 404604     See in Manteia.
RefSeq - XM_009294404
RefSeq - XM_009294405
RefSeq - NM_207072
RefSeq - XM_009294407
RefSeq - XM_009294411
RefSeq Peptide - NP_996955
swissprot - I3IS24
swissprot - A3KPT4
swissprot - F1R161
swissprot - I3IT98
swissprot - Q6NYW6
ZFIN ID - ZDB-GENE-040426-2343
Ensembl - ENSDARG00000020345
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CLASP2ENSGALG00000032647Gallus gallus
 CLASP2ENSG00000163539Homo sapiens
 Clasp2ENSMUSG00000033392Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
clasp1a / cytoplasmic linker associated protein 1a / CLASP1* / Q7Z460* / cytoplasmic linker associated protein 1* / Mus musculus CLIP associating protein 1 (Clasp1), transcript variant 10, mRNA.*ENSDARG0000001028067
FP016005.2ENSDARG0000011590610
FP016005.1ENSDARG000001043587


Protein motifs (from Interpro)
Interpro ID Name
 IPR011989  Armadillo-like helical
 IPR016024  Armadillo-type fold
 IPR021133  HEAT, type 2
 IPR024395  CLASP N-terminal domain
 IPR028399  CLIP-associating protein 1
 IPR034085  TOG domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000226 microtubule cytoskeleton organization ISS
 biological_processGO:0007020 microtubule nucleation ISS
 biological_processGO:0007030 Golgi organization ISS
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0007052 mitotic spindle organization ISS
 biological_processGO:0010458 exit from mitosis ISS
 biological_processGO:0031023 microtubule organizing center organization ISS
 biological_processGO:0031110 regulation of microtubule polymerization or depolymerization ISS
 biological_processGO:0032886 regulation of microtubule-based process ISS
 biological_processGO:0034453 microtubule anchoring ISS
 biological_processGO:0051301 cell division IEA
 cellular_componentGO:0000775 chromosome, centromeric region IEA
 cellular_componentGO:0000776 kinetochore ISS
 cellular_componentGO:0000777 condensed chromosome kinetochore IEA
 cellular_componentGO:0005694 chromosome IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005794 Golgi apparatus ISS
 cellular_componentGO:0005802 trans-Golgi network ISS
 cellular_componentGO:0005815 microtubule organizing center IEA
 cellular_componentGO:0005819 spindle IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005874 microtubule ISS
 cellular_componentGO:0005881 cytoplasmic microtubule ISS
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0031252 cell leading edge ISS
 cellular_componentGO:0032587 ruffle membrane ISS
 cellular_componentGO:0042995 cell projection IEA
 cellular_componentGO:0072686 mitotic spindle ISS
 molecular_functionGO:0008017 microtubule binding ISS
 molecular_functionGO:0051010 microtubule plus-end binding ISS


Pathways (from Reactome)
Pathway description
Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal
Separation of Sister Chromatids
Resolution of Sister Chromatid Cohesion
RHO GTPases Activate Formins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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