ENSDARG00000020581


Danio rerio

Features
Gene ID: ENSDARG00000020581
  
Biological name :otofb
  
Synonyms : otofb / otoferlin b
  
Possible biological names infered from orthology : OTOF / otoferlin / otoferlin isoform 3 / Q9HC10
  
Species: Danio rerio
  
Chr. number: 17
Strand: -1
Band:
Gene start: 50313650
Gene end: 50374005
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000041684
Ensembl peptide - ENSDARP00000123890
Ensembl peptide - ENSDARP00000123935
NCBI entrez gene - 100331283     See in Manteia.
swissprot - F1QFI6
swissprot - F8W4A8
swissprot - F8W4M0
ZFIN ID - ZDB-GENE-110406-5
Ensembl - ENSDARG00000020581
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 OTOFENSGALG00000016577Gallus gallus
 OTOFENSG00000115155Homo sapiens
 OtofENSMUSG00000062372Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
otofa / Q5SPC5 / otoferlin a / OTOF* / Q9HC10* / otoferlin* / otoferlin isoform 3 *ENSDARG0000003083281
fer1l6 / fer-1-like family member 6 / Q2WGJ9*ENSDARG0000001931648
fer1l4 / fer-1-like family member 4ENSDARG0000007695242
myof / myoferlin / Q69ZN7* / Q9NZM1*ENSDARG0000000611235
dysf / dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive) / O75923* / Q9ESD7* / dysferlin*ENSDARG0000000737034
myofl / myoferlin like / MYOF* / Q9NZM1* / myoferlin*ENSDARG0000001712832


Protein motifs (from Interpro)
Interpro ID Name
 IPR000008  C2 domain
 IPR012561  Ferlin B-domain
 IPR012968  FerIin domain
 IPR032362  Ferlin, C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0010996 response to auditory stimulus IGI
 biological_processGO:0050885 neuromuscular process controlling balance IGI
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000075 spinal cord spinal cord curved , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr