ENSGALG00000016577


Gallus gallus

Features
Gene ID: ENSGALG00000016577
  
Biological name :OTOF
  
Synonyms : OTOF / otoferlin
  
Possible biological names infered from orthology : otoferlin isoform 3 / Q9HC10
  
Species: Gallus gallus
  
Chr. number: 3
Strand: 1
Band:
Gene start: 105710954
Gene end: 105781780
  
Corresponding Affymetrix probe sets: GgaAffx.10611.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000026707
NCBI entrez gene - 422007     See in Manteia.
RefSeq - XM_004935859
RefSeq - XM_015285198
RefSeq - XM_015285199
RefSeq - XM_015285200
RefSeq - XM_015285201
RefSeq - XM_015285202
RefSeq - XM_015285203
RefSeq - XM_015285204
RefSeq - XM_015285205
RefSeq - XM_015285206
RefSeq - XM_015285207
RefSeq - XM_420015
RefSeq - XM_004935857
swissprot - E1BS70
Ensembl - ENSGALG00000016577
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 otofaENSDARG00000030832Danio rerio
 otofbENSDARG00000020581Danio rerio
 OTOFENSG00000115155Homo sapiens
 OtofENSMUSG00000062372Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
FER1L6 / fer-1 like family member 6 / Q2WGJ9*ENSGALG0000003378346
Fer1l4*ENSGALG0000003858442
MYOF / myoferlin / Q69ZN7* / Q9NZM1*ENSGALG0000000670532
DYSF / dysferlin / O75923* / Q9ESD7*ENSGALG0000001610531
ENSGALG000000456453


Protein motifs (from Interpro)
Interpro ID Name
 IPR000008  C2 domain
 IPR012561  Ferlin B-domain
 IPR012968  FerIin domain
 IPR029996  Otoferlin
 IPR032362  Ferlin, C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016079 synaptic vesicle exocytosis IEA
 cellular_componentGO:0005623 cell IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0045202 synapse IEA
 cellular_componentGO:0098793 presynapse IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr