ENSDARG00000020948


Danio rerio

Features
Gene ID: ENSDARG00000020948
  
Biological name :gmcl1
  
Synonyms : germ cell-less, spermatogenesis associated 1 / gmcl1
  
Possible biological names infered from orthology : Btbd35f1 / Btbd35f10 / Btbd35f11 / Btbd35f12 / Btbd35f13 / Btbd35f14 / Btbd35f15 / Btbd35f16 / Btbd35f17 / Btbd35f18 / Btbd35f19 / Btbd35f2 / Btbd35f20 / Btbd35f21 / Btbd35f22 / Btbd35f23 / Btbd35f24 / Btbd35f25 / Btbd35f26 / Btbd35f27 / Btbd35f28 / Btbd35f29 / Btbd35f3 / Btbd35f30 / Btbd35f4 / Btbd35f5 / Btbd35f6 / Btbd35f7 / Btbd35f8 / Btbd35f9 / BTB domain containing 35, family member 1 / BTB domain containing 35, family member 10 / BTB domain containing 35, family member 11 / BTB domain containing 35, family member 12 / BTB domain containing 35, family member 13 / BTB domain containing 35, family member 14 / BTB domain containing 35, family member 15 / BTB domain containing 35, family member 16 / BTB domain containing 35, family member 17 / BTB domain containing 35, family member 18 / BTB domain containing 35, family member 19 / BTB domain containing 35, family member 2 / BTB domain containing 35, family member 20 / BTB domain containing 35, family member 21 / BTB domain containing 35, family member 22 / BTB domain containing 35, family member 23 / BTB domain containing 35, family member 24 / BTB domain containing 35, family member 25 / BTB domain containing 35, family member 26 / BTB domain containing 35, family member 27 / BTB domain containing 35, family member 28 / BTB domain containing 35, family member 29 / BTB domain containing 35, family member 3 / BTB domain containing 35, family member 30 / BTB domain containing 35, family member 4 / BTB domain containing 35, family member 5 / BTB domain containing 35, family member 6 / BTB domain containing 35, family member 7 / BTB domain containing 35, family member 8 / BTB domain containing 35, family member 9 / Q920G9 / Q96IK5 / Q99N64
  
Species: Danio rerio
  
Chr. number: 10
Strand: -1
Band:
Gene start: 7673446
Gene end: 7702029
  
Corresponding Affymetrix probe sets: Dr.3520.1.S1_at (Zebrafish Array)   NM_207050_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000002411
NCBI entrez gene - 322146     See in Manteia.
RefSeq - NM_207050
RefSeq Peptide - NP_996933
swissprot - Q6NYQ2
ZFIN ID - ZDB-GENE-030131-865
Ensembl - ENSDARG00000020948
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GMCL1ENSG00000087338Homo sapiens
 Btbd35f1ENSMUSG00000094309Mus musculus
 Btbd35f10ENSMUSG00000095716Mus musculus
 Btbd35f11ENSMUSG00000094558Mus musculus
 Btbd35f12ENSMUSG00000101500Mus musculus
 Btbd35f13ENSMUSG00000095934Mus musculus
 Btbd35f14ENSMUSG00000078324Mus musculus
 Btbd35f15ENSMUSG00000101294Mus musculus
 Btbd35f16ENSMUSG00000101381Mus musculus
 Btbd35f17ENSMUSG00000094273Mus musculus
 Btbd35f18ENSMUSG00000094876Mus musculus
 Btbd35f19ENSMUSG00000094352Mus musculus
 Btbd35f2ENSMUSG00000096194Mus musculus
 Btbd35f20ENSMUSG00000094596Mus musculus
 Btbd35f21ENSMUSG00000099711Mus musculus
 Btbd35f22ENSMUSG00000093857Mus musculus
 Btbd35f23ENSMUSG00000100249Mus musculus
 Btbd35f24ENSMUSG00000096426Mus musculus
 Btbd35f25ENSMUSG00000095637Mus musculus
 Btbd35f26ENSMUSG00000095229Mus musculus
 Btbd35f27ENSMUSG00000094860Mus musculus
 Btbd35f28ENSMUSG00000094307Mus musculus
 Btbd35f29ENSMUSG00000094391Mus musculus
 Btbd35f3ENSMUSG00000078218Mus musculus
 Btbd35f30ENSMUSG00000094361Mus musculus
 Btbd35f4ENSMUSG00000078213Mus musculus
 Btbd35f6ENSMUSG00000096915Mus musculus
 Btbd35f7ENSMUSG00000095814Mus musculus
 Btbd35f8ENSMUSG00000094155Mus musculus
 Btbd35f9ENSMUSG00000095558Mus musculus
 Gmcl1ENSMUSG00000001157Mus musculus
 Q99N64ENSMUSG00000094727Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
btbd16 / BTB (POZ) domain containing 16 / Q32M84* / E9Q173* / BTB domain containing 16* / BTB/POZ domain-containing protein 16 *ENSDARG0000002771017


Protein motifs (from Interpro)
Interpro ID Name
 IPR000210  BTB/POZ domain
 IPR011333  SKP1/BTB/POZ domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0000151 ubiquitin ligase complex IBA
 cellular_componentGO:0005634 nucleus IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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