ENSDARG00000021677


Danio rerio

Features
Gene ID: ENSDARG00000021677
  
Biological name :phf11
  
Synonyms : PHD finger protein 11 / phf11
  
Possible biological names infered from orthology : A6H5X4 / Gm6904 / PHD finger protein 11A / Phf11a / Phf11b / Phf11c / Phf11d / Q8BVM9 / Q9UIL8
  
Species: Danio rerio
  
Chr. number: 9
Strand: 1
Band:
Gene start: 29616854
Gene end: 29634354
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000119825
Ensembl peptide - ENSDARP00000031289
Ensembl peptide - ENSDARP00000112678
Ensembl peptide - ENSDARP00000117639
NCBI entrez gene - 569187     See in Manteia.
RefSeq - XM_021478975
RefSeq - XM_017357821
RefSeq - XM_021478976
RefSeq - XM_021478979
RefSeq - XM_692554
RefSeq - XM_005167765
swissprot - F1R115
swissprot - E9QD48
swissprot - E9QDB3
swissprot - F1QY78
ZFIN ID - ZDB-GENE-081104-417
Ensembl - ENSDARG00000021677
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PHF11ENSGALG00000019094Gallus gallus
 PHF11ENSG00000136147Homo sapiens
 A6H5X4ENSMUSG00000068245Mus musculus
 Gm6904ENSMUSG00000090881Mus musculus
 Phf11aENSMUSG00000044703Mus musculus
 Phf11bENSMUSG00000091649Mus musculus
 Phf11cENSMUSG00000091144Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
phf6 / PHD finger protein 6 / Q8IWS0* / Q9D4J7*ENSDARG0000000404615


Protein motifs (from Interpro)
Interpro ID Name
 IPR001965  Zinc finger, PHD-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR034732  Extended PHD (ePHD) domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr