ENSDARG00000004046


Danio rerio

Features
Gene ID: ENSDARG00000004046
  
Biological name :phf6
  
Synonyms : PHD finger protein 6 / phf6
  
Possible biological names infered from orthology : Q8IWS0 / Q9D4J7
  
Species: Danio rerio
  
Chr. number: 14
Strand: 1
Band:
Gene start: 31488579
Gene end: 31507744
  
Corresponding Affymetrix probe sets: Dr.7304.1.S1_at (Zebrafish Array)   NM_199765_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000023828
Ensembl peptide - ENSDARP00000142508
Ensembl peptide - ENSDARP00000142214
Ensembl peptide - ENSDARP00000137488
Ensembl peptide - ENSDARP00000119583
NCBI entrez gene - 327070     See in Manteia.
RefSeq - NM_199765
RefSeq Peptide - NP_956059
swissprot - A0A140LG36
swissprot - A0A0R4IU42
swissprot - F1QPB3
swissprot - E9QEC2
swissprot - A0A140LGX9
ZFIN ID - ZDB-GENE-030131-5278
Ensembl - ENSDARG00000004046
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PHF6ENSGALG00000006094Gallus gallus
 PHF6ENSG00000156531Homo sapiens
 Phf6ENSMUSG00000025626Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
phf11 / PHD finger protein 11 / Q9UIL8* / Gm6904* / A6H5X4* / Phf11a* / Phf11b* / Phf11c* / Phf11d* / Q8BVM9* / PHD finger protein 11A *ENSDARG0000002167723


Protein motifs (from Interpro)
Interpro ID Name
 IPR001965  Zinc finger, PHD-type
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR034732  Extended PHD (ePHD) domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr