ENSDARG00000023967


Danio rerio

Features
Gene ID: ENSDARG00000023967
  
Biological name :atp6v1c1a
  
Synonyms : atp6v1c1a / ATPase H+ transporting V1 subunit C1a / Q7T385
  
Possible biological names infered from orthology : ATP6V1C1 / ATPase, H+ transporting, lysosomal V1 subunit C1 / ATPase H+ transporting V1 subunit C1 / P21283 / Q9Z1G3
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 52748263
Gene end: 52767591
  
Corresponding Affymetrix probe sets: Dr.14783.1.S1_at (Zebrafish Array)   NM_201322_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000147247
Ensembl peptide - ENSDARP00000029343
NCBI entrez gene - 368907     See in Manteia.
RefSeq - NM_201322
RefSeq Peptide - NP_958479
swissprot - B2GPU0
swissprot - Q7T385
ZFIN ID - ZDB-GENE-030616-612
Ensembl - ENSDARG00000023967
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ATP6V1C1ENSGALG00000034099Gallus gallus
 P21283ENSG00000155097Homo sapiens
 Q9Z1G3ENSMUSG00000022295Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q5XIY6 / atp6v1c1b / ATPase H+ transporting V1 subunit C1b / Q9Z1G3* / P21283* / ATP6V1C1* / ATPase H+ transporting V1 subunit C1* / ATPase, H+ transporting, lysosomal V1 subunit C1*ENSDARG0000003588086
atp6v1c2 / ATPase H+ transporting V1 subunit C2 / Q8NEY4* / Q99L60* / ATPase, H+ transporting, lysosomal V1 subunit C2*ENSDARG0000007044052


Protein motifs (from Interpro)
Interpro ID Name
 IPR004907  ATPase, V1 complex, subunit C


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0015991 ATP hydrolysis coupled proton transport IEA
 cellular_componentGO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain IBA
 cellular_componentGO:0005765 lysosomal membrane IBA
 cellular_componentGO:0033180 proton-transporting V-type ATPase, V1 domain IEA
 molecular_functionGO:0008553 proton-exporting ATPase activity, phosphorylative mechanism IBA
 molecular_functionGO:0015078 proton transmembrane transporter activity IEA
 molecular_functionGO:0046961 proton-transporting ATPase activity, rotational mechanism IBA


Pathways (from Reactome)
Pathway description
ROS, RNS production in phagocytes
Insulin receptor recycling
Transferrin endocytosis and recycling
Ion channel transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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