ENSDARG00000024124


Danio rerio

Features
Gene ID: ENSDARG00000024124
  
Biological name :sde2
  
Synonyms : sde2 / SDE2 telomere maintenance homolog (S. pombe)
  
Possible biological names infered from orthology : Q6IQ49 / Q8K1J5 / Replication stress response regulator SDE2 / SDE2 telomere maintenance homolog
  
Species: Danio rerio
  
Chr. number: 22
Strand: -1
Band:
Gene start: 26277618
Gene end: 26289549
  
Corresponding Affymetrix probe sets: Dr.26533.1.A1_at (Zebrafish Array)   Dr.7890.1.A1_at (Zebrafish Array)   NM_001017752_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000043773
NCBI entrez gene - 550448     See in Manteia.
RefSeq - NM_001017752
RefSeq Peptide - NP_001017752
swissprot - F1R058
ZFIN ID - ZDB-GENE-050417-270
Ensembl - ENSDARG00000024124
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SDE2ENSGALG00000009253Gallus gallus
 SDE2ENSG00000143751Homo sapiens
 Sde2ENSMUSG00000038806Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
sf3a3 / splicing factor 3a, subunit 3 / Q12874* / Q9D554*ENSDARG000001001148


Protein motifs (from Interpro)
Interpro ID Name
 IPR024974  Sde2 N-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr