ENSDARG00000024141


Danio rerio

Features
Gene ID: ENSDARG00000024141
  
Biological name :cav3
  
Synonyms : cav3 / caveolin 3
  
Possible biological names infered from orthology : P51637 / P56539
  
Species: Danio rerio
  
Chr. number: 6
Strand: -1
Band:
Gene start: 41996066
Gene end: 42003780
  
Corresponding Affymetrix probe sets: Dr.1435.1.S1_at (Zebrafish Array)   NM_205738_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000034317
NCBI entrez gene - 449679     See in Manteia.
RefSeq - NM_205738
RefSeq Peptide - NP_991301
swissprot - Q6YLH7
ZFIN ID - ZDB-GENE-050522-426
Ensembl - ENSDARG00000024141
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CAV3ENSGALG00000008351Gallus gallus
 CAV3ENSG00000182533Homo sapiens
 Cav3ENSMUSG00000062694Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cav1 / caveolin 1 / P49817* / Q03135*ENSDARG0000010374769
zgc:172270ENSDARG0000000363239
cav2 / caveolin 2 / P51636* / Q9WVC3*ENSDARG0000005200035
zgc:158296ENSDARG0000007092333


Protein motifs (from Interpro)
Interpro ID Name
 IPR001612  Caveolin
 IPR018361  Caveolin, conserved site
 IPR031091  Caveolin-3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007520 myoblast fusion IMP
 biological_processGO:0023051 regulation of signaling IEA
 biological_processGO:0042693 muscle cell fate commitment IMP
 biological_processGO:0045214 sarcomere organization IMP
 biological_processGO:0046716 muscle cell cellular homeostasis IEA
 biological_processGO:0060035 notochord cell development IGI
 biological_processGO:0070836 caveola assembly IEA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005901 caveola IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0042383 sarcolemma IDA
 molecular_functionGO:0032947 protein-containing complex scaffold activity IEA
 molecular_functionGO:0044325 ion channel binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000135 notochord notochord caveola decreased mass density , abnormal
notochord cell circular , abnormal
notochord increased fragility , abnormal
Show

 ZFA:0005746 notochord inner cell notochord inner cell collapsed , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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