ENSDARG00000024537


Danio rerio

Features
Gene ID: ENSDARG00000024537
  
Biological name :emilin1a
  
Synonyms : elastin microfibril interfacer 1a / emilin1a
  
Possible biological names infered from orthology : elastin microfibril interfacer 1 / EMILIN1 / Q99K41 / Q9Y6C2
  
Species: Danio rerio
  
Chr. number: 20
Strand: 1
Band:
Gene start: 34845672
Gene end: 34865031
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000033466
Ensembl peptide - ENSDARP00000106093
NCBI entrez gene - 566473     See in Manteia.
RefSeq - NM_001030207
RefSeq - XM_005160756
RefSeq Peptide - NP_001025378
swissprot - Q5TZ63
swissprot - F1QC17
ZFIN ID - ZDB-GENE-041001-191
Ensembl - ENSDARG00000024537
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000033187Gallus gallus
 Q9Y6C2ENSG00000138080Homo sapiens
 Q99K41ENSMUSG00000029163Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
emilin1b / elastin microfibril interfacer 1b / Q99K41* / Q9Y6C2* / EMILIN1* / elastin microfibril interfacer 1*ENSDARG0000002616655
emilin2a / elastin microfibril interfacer 2a / Q9BXX0* / Q8K482* / EMILIN2* / elastin microfibril interfacer 2* / Mus musculus elastin microfibril interfacer 2 (Emilin2), transcript variant 3, mRNA.*ENSDARG0000006119621
emilin2b / elastin microfibril interfacer 2b / Q9BXX0* / Q8K482* / EMILIN2* / elastin microfibril interfacer 2* / Mus musculus elastin microfibril interfacer 2 (Emilin2), transcript variant 3, mRNA.*ENSDARG0000010217819
emid1 / EMI domain containing 1 / Q91VF5* / Q96A84* / EMI domain-containing protein 1 *ENSDARG0000007611910
emilin3a / elastin microfibril interfacer 3a / P59900* / Q9NT22* / EMILIN3* / elastin microfibril interfacer 3*ENSDARG000000780529
FQ323119.1 / Q9NT22* / EMILIN3* / elastin microfibril interfacer 3*ENSDARG000000762998


Protein motifs (from Interpro)
Interpro ID Name
 IPR001073  C1q domain
 IPR008160  Collagen triple helix repeat
 IPR008983  Tumour necrosis factor-like domain superfamily
 IPR011489  EMI domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IBA
 biological_processGO:0030097 hemopoiesis IMP
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005581 collagen trimer IEA
 cellular_componentGO:0031012 extracellular matrix IBA
 molecular_functionGO:0030023 extracellular matrix constituent conferring elasticity IBA


Pathways (from Reactome)
Pathway description
Molecules associated with elastic fibres


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0009014 hematopoietic stem cell hematopoietic stem cell decreased amount , abnormal
Show

 ZFA:0009256 nucleate erythrocyte nucleate erythrocyte decreased amount , abnormal
Show

 ZFA:0009323 thrombocyte thrombocyte decreased amount , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000024537 emilin1a / elastin microfibril interfacer 1a / Q99K41* / Q9Y6C2* / EMILIN1* / elastin microfibril interfacer 1*  / complex / -
 ENSDARG00000053831 vtnb / vitronectin b / VTN* / P04004* / P29788* / AC002094.3* / vitronectin*  / complex / reaction
 ENSDARG00000090560 mfap5 / microfibril associated protein 5 / Q13361* / Q9QZJ6* / Microfibrillar-associated protein 5 *  / complex






 

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