Manteia

ENSDARG00000025073

Danio rerio

Features

Gene ID:	ENSDARG00000025073

Biological name :	rpl18a

Synonyms :	Q7ZWJ4 / ribosomal protein L18a / rpl18a

Possible biological names infered from orthology :	P62717 / Q02543

Species:	Danio rerio

Chr. number:	4
Strand:	1
Band:
Gene start:	391297
Gene end:	398451

Corresponding Affymetrix probe sets:	Dr.1313.1.S1_at (Zebrafish Array)

Cross references:	Ensembl peptide - ENSDARP00000038658 Ensembl peptide - ENSDARP00000123959 NCBI entrez gene - 394035 See in Manteia. swissprot - F8W484 swissprot - Q7ZWJ4 ZFIN ID - ZDB-GENE-040426-1071 Ensembl - ENSDARG00000025073

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Paralog prediction (from Ensembl)

Paralog name

Similarity(%)

No match

Protein motifs (from Interpro)

Interpro ID	Name
IPR021138	60S ribosomal protein L18a/ L20, eukaryotes
IPR023573	Ribosomal protein 50S-L18Ae/60S-L20/60S-L18A
IPR028877	50S ribosomal protein L18Ae/60S ribosomal protein L20 and L18a

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
biological_process	GO:0006412	translation	IEA
cellular_component	GO:0005840	ribosome	IEA
cellular_component	GO:0022625	cytosolic large ribosomal subunit	IBA
molecular_function	GO:0003723	RNA binding	IBA
molecular_function	GO:0003735	structural constituent of ribosome	IEA

Pathways (from Reactome)

Pathway description

Phenotype (from MGI, Zfin or HPO)

Phenotype

Definition

Genetic BG

No match

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

1 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr