ENSMUSG00000045128


Mus musculus

Features
Gene ID: ENSMUSG00000045128
  
Biological name :Rpl18a
  
Synonyms : P62717 / ribosomal protein L18A / Rpl18a
  
Possible biological names infered from orthology : Q02543
  
Species: Mus musculus
  
Chr. number: 8
Strand: -1
Band: B3.3
Gene start: 70894722
Gene end: 70897412
  
Corresponding Affymetrix probe sets: 10348924 (MoGene1.0st)   10579461 (MoGene1.0st)   1428152_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000058368
Ensembl peptide - ENSMUSP00000148743
Ensembl peptide - ENSMUSP00000148723
Ensembl peptide - ENSMUSP00000148671
Ensembl peptide - ENSMUSP00000148665
Ensembl peptide - ENSMUSP00000148529
Ensembl peptide - ENSMUSP00000148281
NCBI entrez gene - 76808     See in Manteia.
MGI - MGI:1924058
RefSeq - NM_029751
RefSeq Peptide - NP_084027
swissprot - A0A1D5RM79
swissprot - A0A1D5RLW5
swissprot - A0A1D5RLA0
swissprot - A0A1D5RME4
swissprot - P62717
swissprot - A0A1D5RMC7
swissprot - A0A1D5RM85
Ensembl - ENSMUSG00000045128
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q7ZWJ4ENSDARG00000025073Danio rerio
 Q02543ENSG00000105640Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR021138  60S ribosomal protein L18a/ L20, eukaryotes
 IPR023573  Ribosomal protein 50S-L18Ae/60S-L20/60S-L18A
 IPR028877  50S ribosomal protein L18Ae/60S ribosomal protein L20 and L18a


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002181 cytoplasmic translation IEA
 biological_processGO:0006412 translation IEA
 biological_processGO:0097327 response to antineoplastic agent IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit IEA
 cellular_componentGO:0042788 polysomal ribosome IEA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0003735 structural constituent of ribosome IEA


Pathways (from Reactome)
Pathway description
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr