ENSDARG00000026068


Danio rerio

Features
Gene ID: ENSDARG00000026068
  
Biological name :trappc5
  
Synonyms : trafficking protein particle complex 5 / trappc5
  
Possible biological names infered from orthology : Q8IUR0 / Q9CQA1 / Trafficking protein particle complex subunit 5
  
Species: Danio rerio
  
Chr. number: 1
Strand: 1
Band:
Gene start: 45663727
Gene end: 45669444
  
Corresponding Affymetrix probe sets: Dr.4500.1.A1_at (Zebrafish Array)   NM_001002482_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000039210
Ensembl peptide - ENSDARP00000122338
Ensembl peptide - ENSDARP00000123691
NCBI entrez gene - 436755     See in Manteia.
RefSeq - NM_001002482
RefSeq Peptide - NP_001002482
swissprot - Q6DGL5
ZFIN ID - ZDB-GENE-040718-185
Ensembl - ENSDARG00000026068
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q8IUR0ENSG00000181029Homo sapiens
 Q9CQA1ENSMUSG00000040236Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007194  Transport protein particle (TRAPP) component
 IPR016696  TRAPP I complex, subunit 5
 IPR024096  NO signalling/Golgi transport ligand-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0048193 Golgi vesicle transport IEA
 cellular_componentGO:0030008 TRAPP complex IEA


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport
RAB GEFs exchange GTP for GDP on RABs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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