ENSMUSG00000040236


Mus musculus

Features
Gene ID: ENSMUSG00000040236
  
Biological name :Trappc5
  
Synonyms : Q9CQA1 / Trafficking protein particle complex subunit 5 / Trappc5
  
Possible biological names infered from orthology : Q8IUR0 / trafficking protein particle complex 5
  
Species: Mus musculus
  
Chr. number: 8
Strand: 1
Band: A1.1
Gene start: 3676299
Gene end: 3681255
  
Corresponding Affymetrix probe sets: 10569886 (MoGene1.0st)   1418233_a_at (Mouse Genome 430 2.0 Array)   1448999_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000036541
Ensembl peptide - ENSMUSP00000146674
NCBI entrez gene - 66682     See in Manteia.
MGI - MGI:1913932
RefSeq - NM_025701
RefSeq Peptide - NP_079977
swissprot - Q9CQA1
Ensembl - ENSMUSG00000040236
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 trappc5ENSDARG00000026068Danio rerio
 Q8IUR0ENSG00000181029Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007194  Transport protein particle (TRAPP) component
 IPR016696  TRAPP I complex, subunit 5
 IPR024096  NO signalling/Golgi transport ligand-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0048193 Golgi vesicle transport IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0030008 TRAPP complex ISO
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport
RAB GEFs exchange GTP for GDP on RABs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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