ENSDARG00000027472


Danio rerio

Features
Gene ID: ENSDARG00000027472
  
Biological name :gphb5
  
Synonyms : glycoprotein hormone beta 5 / gphb5
  
Possible biological names infered from orthology : Q812B2 / Q86YW7
  
Species: Danio rerio
  
Chr. number: 13
Strand: 1
Band:
Gene start: 37273010
Gene end: 37289109
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000031688
Ensembl peptide - ENSDARP00000120901
NCBI entrez gene - 100310830     See in Manteia.
RefSeq - NM_001166338
RefSeq - XM_009307450
RefSeq Peptide - NP_001159810
swissprot - C6SUS4
swissprot - B7ZCX3
ZFIN ID - ZDB-GENE-090319-4
Ensembl - ENSDARG00000027472
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GPHB5ENSGALG00000028839Gallus gallus
 GPHB5ENSG00000179600Homo sapiens
 Gphb5ENSMUSG00000048982Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:dkey-23i12.9ENSDARG0000010561240


Protein motifs (from Interpro)
Interpro ID Name
 IPR001545  Gonadotropin, beta subunit
 IPR006208  Glycoprotein hormone subunit beta
 IPR029034  Cystine-knot cytokine


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002155 regulation of thyroid hormone mediated signaling pathway IBA
 biological_processGO:0007186 G-protein coupled receptor signaling pathway IBA
 biological_processGO:0007267 cell-cell signaling IBA
 biological_processGO:0009755 hormone-mediated signaling pathway IBA
 biological_processGO:0010469 regulation of signaling receptor activity IEA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0005179 hormone activity IBA


Pathways (from Reactome)
Pathway description
Hormone ligand-binding receptors
G alpha (s) signalling events


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000075403 gpha2 / glycoprotein hormone alpha 2 / Q925Q5* / Q96T91*  / complex






 

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contact: otassy@igbmc.fr