ENSDARG00000027612


Danio rerio

Features
Gene ID: ENSDARG00000027612
  
Biological name :gatad1
  
Synonyms : gatad1 / GATA zinc finger domain containing 1 / Q1L8G7
  
Possible biological names infered from orthology : GATA zinc finger domain-containing protein 1 / Q8WUU5 / Q920S3
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 43969363
Gene end: 43976522
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000051711
NCBI entrez gene - 678617     See in Manteia.
RefSeq - NM_001040364
RefSeq Peptide - NP_001035454
swissprot - Q1L8G7
ZFIN ID - ZDB-GENE-050629-1
Ensembl - ENSDARG00000027612
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GATAD1ENSGALG00000009399Gallus gallus
 GATAD1ENSG00000157259Homo sapiens
 Gatad1ENSMUSG00000007415Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000679  Zinc finger, GATA-type
 IPR013088  Zinc finger, NHR/GATA-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus ISS
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000114 heart heart increased amount , abnormal
heart increased size , abnormal
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 ZFA:0001094 whole organism whole organism decreased life span , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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