ENSMUSG00000007415


Mus musculus

Features
Gene ID: ENSMUSG00000007415
  
Biological name :Gatad1
  
Synonyms : Gatad1 / GATA zinc finger domain-containing protein 1 / Q920S3
  
Possible biological names infered from orthology : GATA zinc finger domain containing 1 / Q8WUU5
  
Species: Mus musculus
  
Chr. number: 5
Strand: -1
Band: A1
Gene start: 3632932
Gene end: 3657185
  
Corresponding Affymetrix probe sets: 10527886 (MoGene1.0st)   10527888 (MoGene1.0st)   1425599_a_at (Mouse Genome 430 2.0 Array)   1452085_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000122092
Ensembl peptide - ENSMUSP00000142480
Ensembl peptide - ENSMUSP00000007559
Ensembl peptide - ENSMUSP00000113271
NCBI entrez gene - 67210     See in Manteia.
MGI - MGI:1914460
RefSeq - NM_026033
RefSeq Peptide - NP_080309
swissprot - A0A0G2JDS4
swissprot - F7CAN4
swissprot - Q920S3
Ensembl - ENSMUSG00000007415
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gatad1ENSDARG00000027612Danio rerio
 GATAD1ENSGALG00000009399Gallus gallus
 GATAD1ENSG00000157259Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000679  Zinc finger, GATA-type
 IPR013088  Zinc finger, NHR/GATA-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0031497 chromatin assembly ISO
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005654 nucleoplasm ISO
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr