ENSDARG00000027899


Danio rerio

Features
Gene ID: ENSDARG00000027899
  
Biological name :sem1
  
Synonyms : sem1 / SEM1, 26S proteasome complex subunit
  
Possible biological names infered from orthology : 26S proteasome complex subunit SEM1 / P60897
  
Species: Danio rerio
  
Chr. number: 19
Strand: -1
Band:
Gene start: 41401133
Gene end: 41405315
  
Corresponding Affymetrix probe sets: Dr.1315.1.S1_at (Zebrafish Array)   Dr.7768.1.A1_at (Zebrafish Array)   NM_199593_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000030382
Ensembl peptide - ENSDARP00000137837
Ensembl peptide - ENSDARP00000130746
NCBI entrez gene - 322269     See in Manteia.
RefSeq - NM_199593
RefSeq Peptide - NP_955887
swissprot - A0A0R4IU67
swissprot - A0A0R4I9Y2
swissprot - F6NMA4
ZFIN ID - ZDB-GENE-030131-988
Ensembl - ENSDARG00000027899
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SEM1ENSGALG00000009733Gallus gallus
 Sem1ENSMUSG00000042541Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007834  DSS1/SEM1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006406 mRNA export from nucleus IEA
 biological_processGO:0043248 proteasome assembly IEA
 cellular_componentGO:0008541 proteasome regulatory particle, lid subcomplex IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr