ENSDARG00000028131


Danio rerio

Features
Gene ID: ENSDARG00000028131
  
Biological name :hccsa.1
  
Synonyms : hccsa.1 / holocytochrome c synthase a
  
Possible biological names infered from orthology : HCCS / holocytochrome c synthase / holocytochrome c synthetase / P53701 / P53702
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 14998612
Gene end: 15033163
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000029466
Ensembl peptide - ENSDARP00000117237
Ensembl peptide - ENSDARP00000147404
NCBI entrez gene - 436771     See in Manteia.
RefSeq - NM_001002498
RefSeq Peptide - NP_001002498
swissprot - F1QPK2
ZFIN ID - ZDB-GENE-040718-202
Ensembl - ENSDARG00000028131
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HCCSENSGALG00000005571Gallus gallus
 HCCSENSG00000004961Homo sapiens
 HccsENSMUSG00000031352Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
hccsb / holocytochrome c synthase b / HCCS* / P53701* / P53702* / holocytochrome c synthase* / holocytochrome c synthetase*ENSDARG0000009935868
hccsa.2 / holocytochrome c synthase a, tandem duplicate 2 / HCCS* / P53701* / P53702* / holocytochrome c synthase* / holocytochrome c synthetase*ENSDARG0000009577645


Protein motifs (from Interpro)
Interpro ID Name
 IPR000511  Cytochrome c/c1 haem-lyase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0018063 cytochrome c-heme linkage IBA
 cellular_componentGO:0005739 mitochondrion IBA
 cellular_componentGO:0005743 mitochondrial inner membrane IEA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0004408 holocytochrome-c synthase activity IBA
 molecular_functionGO:0016829 lyase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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