ENSDARG00000028354


Danio rerio

Features
Gene ID: ENSDARG00000028354
  
Biological name :stxbp6l
  
Synonyms : stxbp6l / syntaxin binding protein 6 (amisyn), like
  
Possible biological names infered from orthology : Q8NFX7 / STXBP6 / syntaxin binding protein 6
  
Species: Danio rerio
  
Chr. number: 20
Strand: 1
Band:
Gene start: 9828769
Gene end: 9848953
  
Corresponding Affymetrix probe sets: Dr.16379.1.A1_at (Zebrafish Array)   NM_001020738_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000138234
Ensembl peptide - ENSDARP00000053843
Ensembl peptide - ENSDARP00000075137
NCBI entrez gene - 100002110     See in Manteia.
RefSeq - NM_001020738
RefSeq Peptide - NP_001018574
swissprot - A0A0R4IU85
swissprot - Q5VSC9
swissprot - Q5VSD0
ZFIN ID - ZDB-GENE-040724-16
Ensembl - ENSDARG00000028354
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 STXBP6ENSGALG00000009847Gallus gallus
 Q8NFX7ENSG00000168952Homo sapiens
 Stxbp6ENSMUSG00000046314Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
stxbp6 / syntaxin binding protein 6 (amisyn)ENSDARG0000008886235
exoc1 / exocyst complex component 1 / Q8R3S6* / Q9NV70* / Mus musculus exocyst complex component 1 (Exoc1), transcript variant 5, mRNA.*ENSDARG0000004301923
si:dkey-245p14.4 / EXOC1L* / Gm7271* / exocyst complex component 1 like*ENSDARG0000007032011


Protein motifs (from Interpro)
Interpro ID Name
 IPR001388  Synaptobrevin
 IPR028258  Exocyst complex component Sec3, PIP2-binding N-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006887 exocytosis IBA
 biological_processGO:0006893 Golgi to plasma membrane transport IBA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0051601 exocyst localization IBA
 cellular_componentGO:0000145 exocyst IBA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005546 phosphatidylinositol-4,5-bisphosphate binding IBA
 molecular_functionGO:0017049 GTP-Rho binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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