ENSDARG00000043019


Danio rerio

Features
Gene ID: ENSDARG00000043019
  
Biological name :exoc1
  
Synonyms : exoc1 / exocyst complex component 1
  
Possible biological names infered from orthology : Mus musculus exocyst complex component 1 (Exoc1), transcript variant 5, mRNA. / Q8R3S6 / Q9NV70
  
Species: Danio rerio
  
Chr. number: 20
Strand: -1
Band:
Gene start: 25853012
Gene end: 25878607
  
Corresponding Affymetrix probe sets: Dr.4849.1.A1_at (Zebrafish Array)   NM_199597_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000127319
Ensembl peptide - ENSDARP00000144820
Ensembl peptide - ENSDARP00000143958
Ensembl peptide - ENSDARP00000063153
Ensembl peptide - ENSDARP00000116284
NCBI entrez gene - 322338     See in Manteia.
RefSeq - NM_199597
RefSeq - XM_005160557
RefSeq - XM_005160558
RefSeq Peptide - NP_955891
swissprot - A3KPP9
swissprot - A0A286Y9W9
swissprot - F1R381
swissprot - U3JAQ0
ZFIN ID - ZDB-GENE-030131-1057
Ensembl - ENSDARG00000043019
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 EXOC1ENSGALG00000013778Gallus gallus
 EXOC1ENSG00000090989Homo sapiens
 Exoc1ENSMUSG00000036435Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
stxbp6 / syntaxin binding protein 6 (amisyn)ENSDARG000000888627
stxbp6l / syntaxin binding protein 6 (amisyn), like / Q8NFX7* / STXBP6* / syntaxin binding protein 6*ENSDARG000000283547
si:dkey-245p14.4 / EXOC1L* / Gm7271* / exocyst complex component 1 like*ENSDARG000000703204


Protein motifs (from Interpro)
Interpro ID Name
 IPR011993  PH-like domain superfamily
 IPR019160  Exocyst complex component Sec3, C-terminal
 IPR028258  Exocyst complex component Sec3, PIP2-binding N-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006887 exocytosis IEA
 biological_processGO:0006893 Golgi to plasma membrane transport IBA
 biological_processGO:0051601 exocyst localization IBA
 cellular_componentGO:0000145 exocyst IEA
 cellular_componentGO:0005886 plasma membrane IBA
 molecular_functionGO:0005546 phosphatidylinositol-4,5-bisphosphate binding IBA
 molecular_functionGO:0017049 GTP-Rho binding IBA


Pathways (from Reactome)
Pathway description
Insulin processing
VxPx cargo-targeting to cilium


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr