ENSDARG00000028848


Danio rerio

Features
Gene ID: ENSDARG00000028848
  
Biological name :lsm12a
  
Synonyms : lsm12a / LSM12 homolog a / Q6NSN1
  
Possible biological names infered from orthology : LSM12 / LSM12 homolog / Q3MHD2 / Q9D0R8
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 22984098
Gene end: 22994433
  
Corresponding Affymetrix probe sets: Dr.15890.1.A1_at (Zebrafish Array)   Dr.16617.1.S1_at (Zebrafish Array)   Dr.16617.2.S1_at (Zebrafish Array)   NM_214817_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000043189
NCBI entrez gene - 407986     See in Manteia.
RefSeq - NM_214817
RefSeq Peptide - NP_999982
swissprot - A7YYF3
swissprot - Q6NSN1
ZFIN ID - ZDB-GENE-040516-12
Ensembl - ENSDARG00000028848
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LSM12ENSG00000161654Homo sapiens
 Lsm12ENSMUSG00000020922Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q6PBA2 / lsm12b / LSM12 homolog b / LSM12* / Q3MHD2* / LSM12 homolog*ENSDARG0000010951087


Protein motifs (from Interpro)
Interpro ID Name
 IPR019181  Anticodon-binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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