ENSDARG00000109510


Danio rerio

Features
Gene ID: ENSDARG00000109510
  
Biological name :lsm12b
  
Synonyms : lsm12b / LSM12 homolog b / Q6PBA2
  
Possible biological names infered from orthology : LSM12 / LSM12 homolog / Q3MHD2 / Q9D0R8
  
Species: Danio rerio
  
Chr. number: 12
Strand: -1
Band:
Gene start: 3287783
Gene end: 3299149
  
Corresponding Affymetrix probe sets: Dr.22492.1.A1_at (Zebrafish Array)   Dr.7708.1.S1_at (Zebrafish Array)   NM_213148_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000152353
NCBI entrez gene - 406422     See in Manteia.
RefSeq - NM_213148
RefSeq Peptide - NP_998313
swissprot - Q6PBA2
ZFIN ID - ZDB-GENE-040426-2164
Ensembl - ENSDARG00000109510
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LSM12ENSG00000161654Homo sapiens
 Lsm12ENSMUSG00000020922Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q6NSN1 / lsm12a / LSM12 homolog a / LSM12* / Q3MHD2* / Q9D0R8* / LSM12 homolog*ENSDARG0000002884887


Protein motifs (from Interpro)
Interpro ID Name
 IPR019181  Anticodon-binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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