ENSDARG00000029063


Danio rerio

Features
Gene ID: ENSDARG00000029063
  
Biological name :clpxa
  
Synonyms : caseinolytic mitochondrial matrix peptidase chaperone subunit a / clpxa
  
Possible biological names infered from orthology : ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial / caseinolytic mitochondrial matrix peptidase chaperone subunit / CLPX / O76031 / Q9JHS4
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 13639473
Gene end: 13679937
  
Corresponding Affymetrix probe sets: Dr.25716.1.A1_at (Zebrafish Array)   Dr.25716.1.A1_x_at (Zebrafish Array)   Dr.4306.1.A1_at (Zebrafish Array)   Dr.7933.1.A1_s_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000132450
Ensembl peptide - ENSDARP00000029891
NCBI entrez gene - 447842     See in Manteia.
swissprot - F1QS10
swissprot - Q66HW5
swissprot - A0A0G2KJF1
ZFIN ID - ZDB-GENE-040912-143
Ensembl - ENSDARG00000029063
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CLPXENSGALG00000007289Gallus gallus
 CLPXENSG00000166855Homo sapiens
 ClpxENSMUSG00000015357Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
clpxb / caseinolytic mitochondrial matrix peptidase chaperone subunit b / CLPX* / Q9JHS4* / O76031* / caseinolytic mitochondrial matrix peptidase chaperone subunit* / ATP-dependent Clp prot...ENSDARG0000006779681


Protein motifs (from Interpro)
Interpro ID Name
 IPR003593  AAA+ ATPase domain
 IPR003959  ATPase, AAA-type, core
 IPR004487  Clp protease, ATP-binding subunit ClpX
 IPR019489  Clp ATPase, C-terminal
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006457 protein folding IEA
 biological_processGO:0006508 proteolysis IBA
 biological_processGO:0030163 protein catabolic process IBA
 biological_processGO:0048821 erythrocyte development IMP
 cellular_componentGO:0005759 mitochondrial matrix IBA
 molecular_functionGO:0004176 ATP-dependent peptidase activity IBA
 molecular_functionGO:0005524 ATP binding IBA
 molecular_functionGO:0051082 unfolded protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0009015 erythroid progenitor cell erythroid progenitor cell decreased amount , abnormal
Show

 ZFA:0009256 nucleate erythrocyte nucleate erythrocyte decreased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr