ENSDARG00000030408


Danio rerio

Features
Gene ID: ENSDARG00000030408
  
Biological name :rps26l
  
Synonyms : ribosomal protein S26, like / rps26l
  
Possible biological names infered from orthology : P62854 / P62855 / ribosomal protein S26 / RPS26
  
Species: Danio rerio
  
Chr. number: 6
Strand: -1
Band:
Gene start: 49520124
Gene end: 49526510
  
Corresponding Affymetrix probe sets: Dr.1282.2.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000111782
swissprot - F1QHJ1
ZFIN ID - ZDB-GENE-040426-1706
Ensembl - ENSDARG00000030408
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RPS26ENSGALG00000032052Gallus gallus
 RPS26ENSG00000197728Homo sapiens
 Rps26ENSMUSG00000025362Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rps26 / ribosomal protein S26 / P62854* / P62855*ENSDARG0000003707198


Protein motifs (from Interpro)
Interpro ID Name
 IPR000892  Ribosomal protein S26e


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0022627 cytosolic small ribosomal subunit IBA
 molecular_functionGO:0003729 mRNA binding IBA
 molecular_functionGO:0003735 structural constituent of ribosome IBA


Pathways (from Reactome)
Pathway description
L13a-mediated translational silencing of Ceruloplasmin expression
SRP-dependent cotranslational protein targeting to membrane
Major pathway of rRNA processing in the nucleolus and cytosol
Translation initiation complex formation
Formation of a pool of free 40S subunits
Formation of the ternary complex, and subsequently, the 43S complex
Ribosomal scanning and start codon recognition
GTP hydrolysis and joining of the 60S ribosomal subunit
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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