ENSGALG00000032052


Gallus gallus

Features
Gene ID: ENSGALG00000032052
  
Biological name :RPS26
  
Synonyms : ribosomal protein S26 / RPS26
  
Possible biological names infered from orthology : P62854 / P62855
  
Species: Gallus gallus
  
Chr. number: 33
Strand: 1
Band:
Gene start: 644808
Gene end: 646220
  
Corresponding Affymetrix probe sets: GgaAffx.11621.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000052582
Ensembl peptide - ENSGALP00000058468
NCBI entrez gene - 100857770     See in Manteia.
RefSeq - XM_015300309
swissprot - A0A1D5PIE9
swissprot - Q5ZM66
Ensembl - ENSGALG00000032052
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rps26ENSDARG00000037071Danio rerio
 rps26lENSDARG00000030408Danio rerio
 RPS26ENSG00000197728Homo sapiens
 Rps26ENSMUSG00000025362Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000892  Ribosomal protein S26e


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002181 cytoplasmic translation IEA
 biological_processGO:0006412 translation IEA
 biological_processGO:0033119 negative regulation of RNA splicing IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0022627 cytosolic small ribosomal subunit IEA
 cellular_componentGO:0042788 polysomal ribosome IEA
 molecular_functionGO:0003729 mRNA binding IEA
 molecular_functionGO:0003735 structural constituent of ribosome IEA
 molecular_functionGO:0045296 cadherin binding IEA


Pathways (from Reactome)
Pathway description
SRP-dependent cotranslational protein targeting to membrane
Translation initiation complex formation
Formation of a pool of free 40S subunits
Formation of the ternary complex, and subsequently, the 43S complex
Ribosomal scanning and start codon recognition
GTP hydrolysis and joining of the 60S ribosomal subunit
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr