ENSDARG00000030478


Danio rerio

Features
Gene ID: ENSDARG00000030478
  
Biological name :zgc:66484
  
Synonyms : zgc:66484
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 9
Strand: -1
Band:
Gene start: 44897806
Gene end: 44905897
  
Corresponding Affymetrix probe sets: Dr.7273.1.A1_at (Zebrafish Array)   NM_199827_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000121410
Ensembl peptide - ENSDARP00000144237
Ensembl peptide - ENSDARP00000133718
Ensembl peptide - ENSDARP00000115345
NCBI entrez gene - 327557     See in Manteia.
RefSeq - NM_199827
RefSeq Peptide - NP_956121
swissprot - E9QBJ1
swissprot - A0A286YAP2
swissprot - F1Q7C3
ZFIN ID - ZDB-GENE-030131-5768
Ensembl - ENSDARG00000030478
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:dkey-275b16.2 / PAOX* / Q8C0L6* / Q6QHF9* / polyamine oxidase* / Mus musculus polyamine oxidase (exo-N4-amino) (Paox), transcript variant 2, mRNA.*ENSDARG0000000338035
smox / spermine oxidase / Q99K82* / Q9NWM0*ENSDARG0000003696735
LO018020.1 / PAOX* / Q6QHF9* / polyamine oxidase*ENSDARG0000010959635
paox1 / polyamine oxidase (exo-N4-amino) 1ENSDARG0000004340332
kdm1a / lysine (K)-specific demethylase 1a / O60341* / Q6ZQ88* / lysine demethylase 1A* / Mus musculus lysine (K)-specific demethylase 1A (Kdm1a), transcript variant 3, mRNA.*ENSDARG0000006067926


Protein motifs (from Interpro)
Interpro ID Name
 IPR002937  Amine oxidase
 IPR023753  FAD/NAD(P)-binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0016491 oxidoreductase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr