ENSDARG00000030573


Danio rerio

Features
Gene ID: ENSDARG00000030573
  
Biological name :nudt1
  
Synonyms : nudix (nucleoside diphosphate linked moiety X)-type motif 1 / nudt1
  
Possible biological names infered from orthology : nudix hydrolase 1 / P36639 / P53368
  
Species: Danio rerio
  
Chr. number: 3
Strand: -1
Band:
Gene start: 42121166
Gene end: 42125655
  
Corresponding Affymetrix probe sets: Dr.1518.1.S1_at (Zebrafish Array)   NM_213418_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000040752
NCBI entrez gene - 406727     See in Manteia.
RefSeq - NM_213418
RefSeq Peptide - NP_998583
swissprot - Q7ZWC3
ZFIN ID - ZDB-GENE-040426-2757
Ensembl - ENSDARG00000030573
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NUDT1ENSGALG00000004245Gallus gallus
 NUDT1ENSG00000106268Homo sapiens
 Nudt1ENSMUSG00000036639Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000086  NUDIX hydrolase domain
 IPR003563  7,8-dihydro-8-oxoguanine triphosphatase
 IPR015797  NUDIX hydrolase-like domain superfamily
 IPR020084  NUDIX hydrolase, conserved site
 IPR020476  NUDIX hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006281 DNA repair IEA
 molecular_functionGO:0008413 8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
Phosphate bond hydrolysis by NUDT proteins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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