ENSDARG00000030656


Danio rerio

Features
Gene ID: ENSDARG00000030656
  
Biological name :sept3
  
Synonyms : A2BGU8 / sept3 / septin 3
  
Possible biological names infered from orthology : Neuronal-specific septin-3 / Q9UH03 / Q9Z1S5
  
Species: Danio rerio
  
Chr. number: 1
Strand: -1
Band:
Gene start: 45616067
Gene end: 45636362
  
Corresponding Affymetrix probe sets: Dr.5111.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000044056
Ensembl peptide - ENSDARP00000146488
NCBI entrez gene - 554123     See in Manteia.
swissprot - A2BGU8
ZFIN ID - ZDB-GENE-050522-375
Ensembl - ENSDARG00000030656
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SEPT3ENSGALG00000011913Gallus gallus
 SEPT3ENSG00000100167Homo sapiens
 Sept3ENSMUSG00000022456Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
sept12 / septin 12 / Q8IYM1*ENSDARG0000001919161
sept9a / septin 9a / SEPT9* / Q9UHD8* / Q80UG5* / septin 9*ENSDARG0000002023558
sept9b / septin 9b / SEPT9* / Q9UHD8* / Q80UG5* / septin 9*ENSDARG0000010390058
sept5a / septin 5a / SEPT5* / Q9Z2Q6* / Q99719* / septin 5* / AC000093.1*ENSDARG0000001384342
SEPT4 / septin-4 / O43236*ENSDARG0000010527141
sept4a / septin 4a / SEPT4* / O43236* / septin 4*ENSDARG0000001038540
sept7a / septin 7a / SEPT7* / Q16181* / septin 7* / septin-7 isoform 2 *ENSDARG0000008764740
sept15 / septin 15ENSDARG0000010288940
sept5b / septin 5bENSDARG0000003603140
sept2 / septin 2 / P42208* / Q15019*ENSDARG0000002759038
sept7b / septin 7b / SEPT7* / Q16181* / septin 7* / septin-7 isoform 2 *ENSDARG0000005267336
zgc:63587ENSDARG0000001714029
zgc:162239 / SEPT4* / O43236* / P28661* / septin 4*ENSDARG0000001965125


Protein motifs (from Interpro)
Interpro ID Name
 IPR008114  Septin 3
 IPR016491  Septin
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR030379  Septin-type guanine nucleotide-binding (G) domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007049 cell cycle IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr