ENSDARG00000030694


Danio rerio

Features
Gene ID: ENSDARG00000030694
  
Biological name :atp6v1e1b
  
Synonyms : atp6v1e1b / ATPase H+ transporting V1 subunit E1b
  
Possible biological names infered from orthology : ATP6V1E1 / ATP6V1E2 / ATPase, H+ transporting, lysosomal V1 subunit E1 / ATPase H+ transporting V1 subunit E1 / ATPase H+ transporting V1 subunit E2 / P36543 / P50518 / Q96A05 / Q9D593 / V-type proton ATPase subunit E 2
  
Species: Danio rerio
  
Chr. number: 4
Strand: -1
Band:
Gene start: 5240126
Gene end: 5247335
  
Corresponding Affymetrix probe sets: Dr.7966.1.S1_at (Zebrafish Array)   NM_173254_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000050220
NCBI entrez gene - 192335     See in Manteia.
RefSeq - NM_173254
RefSeq Peptide - NP_775361
swissprot - Q6NWK4
ZFIN ID - ZDB-GENE-020419-11
Ensembl - ENSDARG00000030694
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ATP6V1E1ENSGALG00000013036Gallus gallus
 P36543ENSG00000131100Homo sapiens
 Q96A05ENSG00000250565Homo sapiens
 P50518ENSMUSG00000019210Mus musculus
 Q9D593ENSMUSG00000053375Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
atp6v1e1a / ATPase H+ transporting V1 subunit E1a / P36543* / Q9D593* / Q96A05* / P50518* / ATP6V1E1* / ATP6V1E2* / V-type proton ATPase subunit E 2 * / ATPase H+ transporting V1 subunit E2...ENSDARG0000001408582


Protein motifs (from Interpro)
Interpro ID Name
 IPR002842  V-type ATPase subunit E


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015991 ATP hydrolysis coupled proton transport IEA
 biological_processGO:0031101 fin regeneration IMP
 biological_processGO:0033336 caudal fin development IMP
 biological_processGO:0060036 notochord cell vacuolation IMP
 biological_processGO:0060041 retina development in camera-type eye IMP
 cellular_componentGO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEA
 molecular_functionGO:0008900 potassium:proton exchanging ATPase activity IDA
 molecular_functionGO:0046961 proton-transporting ATPase activity, rotational mechanism IEA


Pathways (from Reactome)
Pathway description
ROS, RNS production in phagocytes
Insulin receptor recycling
Transferrin endocytosis and recycling
Ion channel transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000095 pharyngeal arch 3-7 skeleton pharyngeal arch 3-7 skeleton quality , abnormal
Show

 ZFA:0000107 eye eye decreased size , abnormal
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 ZFA:0000112 gut gut hypoplastic , abnormal
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 ZFA:0000135 notochord notochord vacuole broken , abnormal
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 ZFA:0000144 retinal pigmented epithelium retinal pigmented epithelium quality , abnormal
retinal pigmented epithelium physical object quality , abnormal
retinal pigmented epithelium translucent , abnormal
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 ZFA:0000217 inner ear inner ear decreased size , abnormal
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 ZFA:0000282 sensory system sensory system quality , abnormal
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 ZFA:0001069 ventral fin fold ventral fin fold decreased size , abnormal
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 ZFA:0001094 whole organism whole organism dead , abnormal
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 ZFA:0001114 head head decreased size , abnormal
head decreased pigmentation , abnormal
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 ZFA:0001115 trunk trunk decreased thickness , abnormal
trunk decreased pigmentation , abnormal
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 ZFA:0001117 post-vent region post-vent region decreased pigmentation , abnormal
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 ZFA:0001227 mandibular arch skeleton mandibular arch skeleton shape , abnormal
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 ZFA:0001269 regenerating fin regenerating fin axon regeneration disrupted , abnormal
regenerating fin cell proliferation decreased process quality , abnormal
Show

 ZFA:0001613 pharyngeal arch 3-7 pharyngeal arch 3-7 shape , abnormal
Show

 ZFA:0001617 otolith otolith quality , abnormal
otolith decreased size , abnormal
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 ZFA:0005220 larval melanophore stripe larval melanophore stripe melanocyte translucent , abnormal
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 ZFA:0009090 pigment cell pigment cell quality , abnormal
pigment cell patchy , abnormal
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 ZFA:0009091 melanocyte melanocyte increased size , abnormal
melanocyte malformed , abnormal
melanocyte translucent , abnormal
melanocyte degenerate , abnormal
melanocyte decreased pigmentation , abnormal
Show

 ZFA:0009154 eye photoreceptor cell eye photoreceptor cell photoreceptor outer segment decreased size , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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