ENSDARG00000030700


Danio rerio

Features
Gene ID: ENSDARG00000030700
  
Biological name :ctps1a
  
Synonyms : ctps1a / CTP synthase 1a
  
Possible biological names infered from orthology : Ctps / CTPS1 / CTP synthase 1 / P17812 / P70698
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 16015881
Gene end: 16031503
  
Corresponding Affymetrix probe sets: Dr.25770.1.S1_at (Zebrafish Array)   NM_199211_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000156143
Ensembl peptide - ENSDARP00000121703
NCBI entrez gene - 322089     See in Manteia.
RefSeq - NM_199211
RefSeq Peptide - NP_954681
swissprot - A3QJW5
ZFIN ID - ZDB-GENE-030131-808
Ensembl - ENSDARG00000030700
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CTPS1ENSGALG00000042967Gallus gallus
 CTPS1ENSG00000171793Homo sapiens
 CtpsENSMUSG00000028633Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ctps1b / CTP synthase 1b / Ctps* / CTPS1* / P17812* / P70698* / CTP synthase 1*ENSDARG0000009838688


Protein motifs (from Interpro)
Interpro ID Name
 IPR004468  CTP synthase
 IPR017456  CTP synthase, N-terminal
 IPR017926  Glutamine amidotransferase
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR029062  Class I glutamine amidotransferase-like
 IPR033828  CTP synthase GATase domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006221 pyrimidine nucleotide biosynthetic process IEA
 biological_processGO:0006241 CTP biosynthetic process IEA
 biological_processGO:0006541 glutamine metabolic process IEA
 biological_processGO:0044210 "de novo" CTP biosynthetic process IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003883 CTP synthase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016874 ligase activity IEA


Pathways (from Reactome)
Pathway description
Interconversion of nucleotide di- and triphosphates


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000030700 ctps1a / CTP synthase 1a / Ctps* / CTPS1* / P17812* / P70698* / CTP synthase 1*  / complex
 ENSDARG00000098386 ctps1b / CTP synthase 1b / Ctps* / CTPS1* / P17812* / P70698* / CTP synthase 1*  / complex






 

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