ENSDARG00000030913


Danio rerio

Features
Gene ID: ENSDARG00000030913
  
Biological name :cluha
  
Synonyms : cluha / clustered mitochondria (cluA/CLU1) homolog a
  
Possible biological names infered from orthology : CLUH / clustered mitochondria homolog / O75153
  
Species: Danio rerio
  
Chr. number: 15
Strand: -1
Band:
Gene start: 25321572
Gene end: 25367309
  
Corresponding Affymetrix probe sets: Dr.3606.1.A1_at (Zebrafish Array)   NM_001077560_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000047470
Ensembl peptide - ENSDARP00000126730
Ensembl peptide - ENSDARP00000126791
Ensembl peptide - ENSDARP00000126976
NCBI entrez gene - 562666     See in Manteia.
RefSeq - NM_001077560
RefSeq - XM_005157587
RefSeq Peptide - NP_001071028
swissprot - R4GE19
swissprot - R4GE78
swissprot - R4GER3
swissprot - F1QSU2
ZFIN ID - ZDB-GENE-061103-457
Ensembl - ENSDARG00000030913
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CLUHENSGALG00000005854Gallus gallus
 CLUHENSG00000132361Homo sapiens
 CluhENSMUSG00000020741Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cluhb / clustered mitochondria (cluA/CLU1) homolog b / CLUH* / O75153* / clustered mitochondria homolog*ENSDARG0000006056646
si:ch211-166a6.5ENSDARG0000007974533


Protein motifs (from Interpro)
Interpro ID Name
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR011991  ArsR-like helix-turn-helix domain
 IPR023231  GSKIP domain superfamily
 IPR025697  CLU domain
 IPR027523  Clustered mitochondria protein
 IPR028275  Clustered mitochondria protein, N-terminal
 IPR033646  CLU central domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007005 mitochondrion organization IEA
 biological_processGO:0048312 intracellular distribution of mitochondria IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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