ENSDARG00000031495


Danio rerio

Features
Gene ID: ENSDARG00000031495
  
Biological name :seta
  
Synonyms : seta / SET nuclear proto-oncogene a
  
Possible biological names infered from orthology : P0DME0 / Protein SET / Q01105 / Q9EQU5 / SET / SET-like protein / SET nuclear proto-oncogene / SETSIP
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 2585256
Gene end: 2591654
  
Corresponding Affymetrix probe sets: Dr.25850.1.S1_at (Zebrafish Array)   NM_201475_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000049108
NCBI entrez gene - 323501     See in Manteia.
RefSeq - NM_201475
RefSeq Peptide - NP_958883
swissprot - Q7ZUY0
ZFIN ID - ZDB-GENE-030131-2221
Ensembl - ENSDARG00000031495
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SETENSGALG00000004701Gallus gallus
 P0DME0ENSG00000230667Homo sapiens
 SETENSG00000119335Homo sapiens
 SetENSMUSG00000054766Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
setb / SET nuclear proto-oncogene b / SET* / P0DME0* / Q01105* / Q9EQU5* / SETSIP* / Protein SET * / SET-like protein* / SET nuclear proto-oncogene*ENSDARG0000000392088
tspy / testis specific protein, Y-linked / TSPY3* / TSPY1* / TSPY2* / TSPY8* / TSPY4* / Q69ZB3* / Q7TQI8* / Q86VY4* / Q8N831* / Q8VD63* / Q9H0U9* / Q9H2G4* / Q9UJ04* / TSPYL6* / TSPYL5* / T...ENSDARG0000000501530


Protein motifs (from Interpro)
Interpro ID Name
 IPR002164  Nucleosome assembly protein (NAP)


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006334 nucleosome assembly IEA
 cellular_componentGO:0005634 nucleus IEA


Pathways (from Reactome)
Pathway description
Condensation of Prophase Chromosomes
HuR (ELAVL1) binds and stabilizes mRNA


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000058372 mcph1 / microcephalin 1 / Q7TT79* / Q8NEM0* / Microcephalin *  / reaction / complex






 

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