ENSDARG00000031774


Danio rerio

Features
Gene ID: ENSDARG00000031774
  
Biological name :pus7
  
Synonyms : pseudouridylate synthase 7 (putative) / pus7
  
Possible biological names infered from orthology : pseudouridylate synthase 7 / Q96PZ0
  
Species: Danio rerio
  
Chr. number: 25
Strand: 1
Band:
Gene start: 235992
Gene end: 244424
  
Corresponding Affymetrix probe sets: Dr.14734.1.A1_a_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000127603
Ensembl peptide - ENSDARP00000133410
Ensembl peptide - ENSDARP00000128563
Ensembl peptide - ENSDARP00000040498
Ensembl peptide - ENSDARP00000108331
NCBI entrez gene - 402995     See in Manteia.
RefSeq - NM_001122698
RefSeq Peptide - NP_001116170
swissprot - F1QUN2
swissprot - X1WBL2
swissprot - X1WEB2
swissprot - B1H1H9
swissprot - A0A0H2UKK8
ZFIN ID - ZDB-GENE-060620-1
Ensembl - ENSDARG00000031774
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PUS7ENSGALG00000008132Gallus gallus
 PUS7ENSG00000091127Homo sapiens
 Pus7ENSMUSG00000057541Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pus7l / Q1L8I0 / pseudouridylate synthase 7-like / Q8CE46* / Q9H0K6* / Pseudouridylate synthase 7 homolog-like protein *ENSDARG0000006978022


Protein motifs (from Interpro)
Interpro ID Name
 IPR001374  R3H domain
 IPR001656  Pseudouridine synthase, TruD
 IPR011760  Pseudouridine synthase, TruD, insertion domain
 IPR020103  Pseudouridine synthase, catalytic domain superfamily
 IPR020119  Pseudouridine synthase TruD, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001522 pseudouridine synthesis IEA
 biological_processGO:0009451 RNA modification IEA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0009982 pseudouridine synthase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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