ENSDARG00000069780


Danio rerio

Features
Gene ID: ENSDARG00000069780
  
Biological name :pus7l
  
Synonyms : pseudouridylate synthase 7-like / pus7l / Q1L8I0
  
Possible biological names infered from orthology : Pseudouridylate synthase 7 homolog-like protein / Q8CE46 / Q9H0K6
  
Species: Danio rerio
  
Chr. number: 4
Strand: -1
Band:
Gene start: 14188327
Gene end: 14192254
  
Corresponding Affymetrix probe sets: Dr.25543.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000115135
Ensembl peptide - ENSDARP00000121067
Ensembl peptide - ENSDARP00000121855
Ensembl peptide - ENSDARP00000122924
NCBI entrez gene - 561376     See in Manteia.
RefSeq - NM_001044957
RefSeq Peptide - NP_001038422
swissprot - F1R3S1
swissprot - Q1L8H7
swissprot - Q1L8H9
swissprot - Q1L8I0
ZFIN ID - ZDB-GENE-050419-188
Ensembl - ENSDARG00000069780
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PUS7LENSGALG00000009577Gallus gallus
 PUS7LENSG00000129317Homo sapiens
 Pus7lENSMUSG00000033356Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pus7 / pseudouridylate synthase 7 (putative) / Q96PZ0* / pseudouridylate synthase 7*ENSDARG0000003177421


Protein motifs (from Interpro)
Interpro ID Name
 IPR001656  Pseudouridine synthase, TruD
 IPR011760  Pseudouridine synthase, TruD, insertion domain
 IPR020103  Pseudouridine synthase, catalytic domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001522 pseudouridine synthesis IEA
 biological_processGO:0008033 tRNA processing IEA
 biological_processGO:0009451 RNA modification IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0009982 pseudouridine synthase activity IEA
 molecular_functionGO:0016853 isomerase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr