ENSDARG00000032516


Danio rerio

Features
Gene ID: ENSDARG00000032516
  
Biological name :rrp36
  
Synonyms : ribosomal RNA processing 36 / rrp36
  
Possible biological names infered from orthology : Q96EU6
  
Species: Danio rerio
  
Chr. number: 22
Strand: 1
Band:
Gene start: 15343953
Gene end: 15352546
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000045681
NCBI entrez gene - 321183     See in Manteia.
RefSeq - NM_001079944
RefSeq Peptide - NP_001073413
swissprot - Q1L876
ZFIN ID - ZDB-GENE-030131-9751
Ensembl - ENSDARG00000032516
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RRP36ENSGALG00000028056Gallus gallus
 RRP36ENSG00000124541Homo sapiens
 Rrp36ENSMUSG00000023971Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR009292  rRNA biogenesis protein RRP36


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IBA
 biological_processGO:0000469 cleavage involved in rRNA processing IEA
 biological_processGO:0006364 rRNA processing IEA
 biological_processGO:0042254 ribosome biogenesis IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0030686 90S preribosome IBA


Pathways (from Reactome)
Pathway description
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000059711 nol6 / nucleolar protein 6 (RNA-associated) / Q9H6R4* / nucleolar protein 6*  / complex






 

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contact: otassy@igbmc.fr