ENSG00000124541


Homo sapiens

Features
Gene ID: ENSG00000124541
  
Biological name :RRP36
  
Synonyms : Q96EU6 / ribosomal RNA processing 36 / RRP36
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 6
Strand: 1
Band: p21.1
Gene start: 43021645
Gene end: 43034156
  
Corresponding Affymetrix probe sets: 225788_at (Human Genome U133 Plus 2.0 Array)   235223_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000244496
Ensembl peptide - ENSP00000475391
NCBI entrez gene - 88745     See in Manteia.
OMIM - 613475
RefSeq - NM_033112
RefSeq - NM_001329704
RefSeq Peptide - NP_001316633
RefSeq Peptide - NP_149103
swissprot - Q96EU6
swissprot - U3KPZ9
Ensembl - ENSG00000124541
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rrp36ENSDARG00000032516Danio rerio
 RRP36ENSGALG00000028056Gallus gallus
 Rrp36ENSMUSG00000023971Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR009292  rRNA biogenesis protein RRP36


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IBA
 biological_processGO:0000469 cleavage involved in rRNA processing IEA
 biological_processGO:0006364 rRNA processing TAS
 biological_processGO:0042254 ribosome biogenesis IEA
 biological_processGO:0042274 ribosomal small subunit biogenesis IDA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0030686 90S preribosome IBA
 molecular_functionGO:0003723 RNA binding HDA


Pathways (from Reactome)
Pathway description
rRNA modification in the nucleus and cytosol
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000165271 NOL6 / Q9H6R4 / nucleolar protein 6  / complex
 ENSG00000189306 RRP7A / Q9Y3A4 / ribosomal RNA processing 7 homolog A  / complex






 

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contact: otassy@igbmc.fr