ENSG00000189306


Homo sapiens

Features
Gene ID: ENSG00000189306
  
Biological name :RRP7A
  
Synonyms : Q9Y3A4 / ribosomal RNA processing 7 homolog A / RRP7A
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 22
Strand: -1
Band: q13.2
Gene start: 42509968
Gene end: 42519802
  
Corresponding Affymetrix probe sets: 202937_x_at (Human Genome U133 Plus 2.0 Array)   202938_x_at (Human Genome U133 Plus 2.0 Array)   214828_s_at (Human Genome U133 Plus 2.0 Array)   229564_at (Human Genome U133 Plus 2.0 Array)   33307_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000321449
Ensembl peptide - ENSP00000405547
NCBI entrez gene - 27341     See in Manteia.
RefSeq - NM_015703
RefSeq Peptide - NP_056518
swissprot - F8WAT7
swissprot - Q9Y3A4
Ensembl - ENSG00000189306
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rrp7aENSDARG00000098934Danio rerio
 RRP7AENSGALG00000011866Gallus gallus
 Rrp7aENSMUSG00000018040Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR024326  Ribosomal RNA-processing protein 7
 IPR034890  Rrp7A, RNA recognition motif
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000028 ribosomal small subunit assembly IBA
 biological_processGO:0001825 blastocyst formation IEA
 biological_processGO:0006364 rRNA processing IBA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0032545 CURI complex IBA
 cellular_componentGO:0034456 UTP-C complex IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
rRNA modification in the nucleus and cytosol
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000165271 NOL6 / Q9H6R4 / nucleolar protein 6  / complex
 ENSG00000124541 RRP36 / Q96EU6 / ribosomal RNA processing 36  / complex






 

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