ENSDARG00000098934


Danio rerio

Features
Gene ID: ENSDARG00000098934
  
Biological name :rrp7a
  
Synonyms : ribosomal RNA processing 7 homolog A / rrp7a
  
Possible biological names infered from orthology : Q9D1C9 / Q9Y3A4 / Ribosomal RNA-processing A
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 1219344
Gene end: 1222249
  
Corresponding Affymetrix probe sets: Dr.24135.1.A1_at (Zebrafish Array)   NM_001017579_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000132397
NCBI entrez gene - 550241     See in Manteia.
RefSeq - NM_001017579
RefSeq Peptide - NP_001017579
swissprot - A0A0R4IGH7
ZFIN ID - ZDB-GENE-050417-38
Ensembl - ENSDARG00000098934
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RRP7AENSGALG00000011866Gallus gallus
 RRP7AENSG00000189306Homo sapiens
 Rrp7aENSMUSG00000018040Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR024326  Ribosomal RNA-processing protein 7
 IPR034890  Rrp7A, RNA recognition motif


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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