ENSDARG00000033227


Danio rerio

Features
Gene ID: ENSDARG00000033227
  
Biological name :lect2l
  
Synonyms : lect2l / leukocyte cell-derived chemotaxin 2 like
  
Possible biological names infered from orthology : LECT2 / leukocyte cell derived chemotaxin 2 / O14960
  
Species: Danio rerio
  
Chr. number: 14
Strand: 1
Band:
Gene start: 36885524
Gene end: 36887063
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000038063
NCBI entrez gene - 567278     See in Manteia.
RefSeq - NM_001048055
RefSeq Peptide - NP_001041520
swissprot - Q0H0R9
ZFIN ID - ZDB-GENE-070127-4
Ensembl - ENSDARG00000033227
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LECT2ENSGALG00000006323Gallus gallus
 LECT2ENSG00000145826Homo sapiens
 Lect2ENSMUSG00000021539Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-132p1.3 / LECT2* / O14960* / leukocyte cell derived chemotaxin 2*ENSDARG0000009088980
si:ch211-132p1.4 / LECT2 (1 of many) / LECT2* / O14960* / leukocyte cell derived chemotaxin 2*ENSDARG0000008648375
si:ch1073-204b8.1ENSDARG0000010192533


Protein motifs (from Interpro)
Interpro ID Name
 IPR008663  Leukocyte cell-derived chemotaxin 2
 IPR017381  Leukocyte cell-derived chemotaxin 2, chordata


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0009617 response to bacterium IDA
 biological_processGO:0044782 cilium organization IMP
 biological_processGO:0060271 cilium assembly IMP
 cellular_componentGO:0005737 cytoplasm IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000150 pronephric duct pronephric duct cilium decreased length , abnormal
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 ZFA:0001094 whole organism whole organism anterior-posterior axis curved , abnormal
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 ZFA:0001261 ventricular system ventricular system hydrocephalic , abnormal
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 ZFA:0001617 otolith otolith morphology , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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