ENSDARG00000033418


Danio rerio

Features
Gene ID: ENSDARG00000033418
  
Biological name :gpatch1
  
Synonyms : gpatch1 / G patch domain containing 1
  
Possible biological names infered from orthology : G patch domain-containing protein 1 / Q9BRR8 / Q9DBM1
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 38265363
Gene end: 38277255
  
Corresponding Affymetrix probe sets: Dr.11605.1.A1_a_at (Zebrafish Array)   Dr.11605.1.A1_x_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000014631
Ensembl peptide - ENSDARP00000142648
NCBI entrez gene - 448925     See in Manteia.
RefSeq - NM_001204123
RefSeq Peptide - NP_001191052
swissprot - G1K2G6
swissprot - A0A1D5NS39
ZFIN ID - ZDB-GENE-040914-65
Ensembl - ENSDARG00000033418
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GPATCH1ENSGALG00000004839Gallus gallus
 Q9BRR8ENSG00000076650Homo sapiens
 Q9DBM1ENSMUSG00000063808Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000467  G-patch domain
 IPR011666  G patch domain-containing protein, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006397 mRNA processing IEA
 molecular_functionGO:0003676 nucleic acid binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr