ENSGALG00000004839


Gallus gallus

Features
Gene ID: ENSGALG00000004839
  
Biological name :GPATCH1
  
Synonyms : GPATCH1 / G-patch domain containing 1
  
Possible biological names infered from orthology : G patch domain-containing protein 1 / Q9BRR8 / Q9DBM1
  
Species: Gallus gallus
  
Chr. number: 11
Strand: 1
Band:
Gene start: 10156095
Gene end: 10276444
  
Corresponding Affymetrix probe sets: GgaAffx.11948.1.S1_s_at (Chicken Array)   GgaAffx.3006.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000007714
Ensembl peptide - ENSGALP00000038593
NCBI entrez gene - 415772     See in Manteia.
RefSeq - XM_004944230
swissprot - F1NFC3
swissprot - F1NUA0
Ensembl - ENSGALG00000004839
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gpatch1ENSDARG00000033418Danio rerio
 Q9BRR8ENSG00000076650Homo sapiens
 Q9DBM1ENSMUSG00000063808Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000467  G-patch domain
 IPR011666  G patch domain-containing protein, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006397 mRNA processing IEA
 cellular_componentGO:0071013 catalytic step 2 spliceosome IEA
 molecular_functionGO:0003676 nucleic acid binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr