ENSDARG00000033450


Danio rerio

Features
Gene ID: ENSDARG00000033450
  
Biological name :nkap
  
Synonyms : NFKB activating protein / nkap
  
Possible biological names infered from orthology : NF-kappa-B-activating protein / NFKB activating protein like / NKAPL / NKAP-like protein / Q5M9Q1 / Q5SZT7 / Q8N5F7 / Q9D0F4
  
Species: Danio rerio
  
Chr. number: 14
Strand: -1
Band:
Gene start: 33418500
Gene end: 33425233
  
Corresponding Affymetrix probe sets: Dr.16023.1.A1_at (Zebrafish Array)   Dr.16023.2.S1_at (Zebrafish Array)   NM_001003414_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000001288
Ensembl peptide - ENSDARP00000096578
Ensembl peptide - ENSDARP00000107577
NCBI entrez gene - 336120     See in Manteia.
RefSeq - NM_001003414
RefSeq Peptide - NP_001003414
swissprot - F1R4A9
swissprot - E7F275
swissprot - Q6DRM1
ZFIN ID - ZDB-GENE-030131-8064
Ensembl - ENSDARG00000033450
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NKAPENSGALG00000020262Gallus gallus
 NKAPENSG00000101882Homo sapiens
 NKAPLENSG00000189134Homo sapiens
 NkapENSMUSG00000016409Mus musculus
 NkaplENSMUSG00000059395Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR009269  NF-kappa-B-activating protein
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007219 Notch signaling pathway IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IEA
 molecular_functionGO:0003682 chromatin binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain necrotic , abnormal
Show

 ZFA:0000012 central nervous system central nervous system necrotic , abnormal
Show

 ZFA:0000042 midbrain hindbrain boundary midbrain hindbrain boundary quality , abnormal
midbrain hindbrain boundary condensed , abnormal
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 ZFA:0000054 pericardium pericardium edematous , abnormal
Show

 ZFA:0000084 yolk yolk non-functional , abnormal
Show

 ZFA:0000107 eye eye decreased size , abnormal
Show

 ZFA:0000112 gut gut quality , abnormal
gut hypoplastic , abnormal
Show

 ZFA:0000114 heart heart quality , abnormal
Show

 ZFA:0000123 liver liver quality , abnormal
liver hypoplastic , abnormal
Show

 ZFA:0001094 whole organism whole organism viability , abnormal
Show

 ZFA:0001114 head head flat , abnormal
head decreased size , abnormal
Show

 ZFA:0001115 trunk trunk decreased thickness , abnormal
trunk necrotic , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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