ENSDARG00000033655


Danio rerio

Features
Gene ID: ENSDARG00000033655
  
Biological name :stmn1b
  
Synonyms : stathmin 1b / stmn1b
  
Possible biological names infered from orthology : P16949 / P54227 / stathmin 1 / STMN1
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 34523515
Gene end: 34527206
  
Corresponding Affymetrix probe sets: Dr.4412.14.A1_at (Zebrafish Array)   Dr.4412.16.A1_at (Zebrafish Array)   NM_001017850_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000041006
NCBI entrez gene - 550548     See in Manteia.
RefSeq - NM_001017850
RefSeq Peptide - NP_001017850
swissprot - Q568Q7
ZFIN ID - ZDB-GENE-050417-397
Ensembl - ENSDARG00000033655
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 STMN1ENSGALG00000001475Gallus gallus
 STMN1ENSG00000117632Homo sapiens
 Stmn1ENSMUSG00000028832Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
stmn1a / stathmin 1a / STMN1* / P16949* / P54227* / stathmin 1*ENSDARG0000000416983
stmn4 / stathmin-like 4 / P63042* / Q9H169* / stathmin 4*ENSDARG0000003010658
stmn4l / stathmin-like 4, like / STMN4* / Q9H169* / P63042* / stathmin 4* / stathmin-like 4*ENSDARG0000004393255
stmn2a / stathmin 2a / STMN2* / Q93045* / P55821* / stathmin 2* / stathmin-like 2*ENSDARG0000003323454
stmn2b / stathmin 2b / STMN2* / Q93045* / P55821* / stathmin 2* / stathmin-like 2*ENSDARG0000007053752
stmn3 / stathmin-like 3 / O70166* / Q9NZ72* / stathmin 3*ENSDARG0000003846550


Protein motifs (from Interpro)
Interpro ID Name
 IPR000956  Stathmin family
 IPR030514  Stathmin, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007019 microtubule depolymerization IBA
 biological_processGO:0031110 regulation of microtubule polymerization or depolymerization IEA
 biological_processGO:0031175 neuron projection development IBA
 biological_processGO:0051493 regulation of cytoskeleton organization IBA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0043005 neuron projection IBA
 molecular_functionGO:0015631 tubulin binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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