ENSDARG00000034086


Danio rerio

Features
Gene ID: ENSDARG00000034086
  
Biological name :zgc:65895
  
Synonyms : zgc:65895
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 59967994
Gene end: 59972559
  
Corresponding Affymetrix probe sets: Dr.16743.1.A1_at (Zebrafish Array)   NM_200574_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000050456
NCBI entrez gene - 393546     See in Manteia.
RefSeq - NM_200574
RefSeq Peptide - NP_956868
swissprot - Q6NZS2
ZFIN ID - ZDB-GENE-040426-1466
Ensembl - ENSDARG00000034086
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tsc22d1 / TSC22 domain family, member 1 / P62500* / Q15714*ENSDARG0000003830664
tsc22d2 / TSC22 domain family 2 / O75157* / TSC22 domain family member 2*ENSDARG0000004183947
si:ch211-220e11.3 / TSC22D3 (1 of many) / Q99576* / Q9Z2S7* / TSC22D3* / TSC22 domain family member 3* / TSC22 domain family protein 3 *ENSDARG0000010549846
tsc22d3 / TSC22 domain family, member 3 / Q99576* / Q9Z2S7* / TSC22 domain family protein 3 *ENSDARG0000007566645


Protein motifs (from Interpro)
Interpro ID Name
 IPR000580  TSC-22 / Dip / Bun


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr